0
1
0
j.tellechea-luzardo@newcastle.ac.uk
1 file changed with 58 insertions and 57 deletions:
58
57
| 1 |
LOCUS pEC-Vector |
|
| 1 |
LOCUS pEC-Vector 3811 bp ds-DNA circular 11-DEC-2019 |
|
| 2 | 2 |
DEFINITION . |
| 3 | 3 |
ACCESSION pTarget |
| 4 | 4 |
SOURCE Unknown. |
| 5 | 5 |
ORGANISM Unknown Unclassified. |
| 6 | 6 |
FEATURES Location/Qualifiers |
| 7 |
CDS complement(2531..2971) |
|
| 8 |
/label="cat CDS" |
|
| 9 |
/ApEinfo_revcolor=#c7b0e3 |
|
| 10 |
/ApEinfo_fwdcolor=#c7b0e3 |
|
| 11 |
gene complement(2972..3190) |
|
| 12 |
/label="cat gene" |
|
| 13 |
/ApEinfo_revcolor=#75c6a9 |
|
| 14 |
/ApEinfo_fwdcolor=#75c6a9 |
|
| 15 | 7 |
misc_feature 2080..2522 |
| 16 | 8 |
/label="left_homology" |
| 17 | 9 |
/ApEinfo_revcolor=#ffef86 |
| 18 | 10 |
/ApEinfo_fwdcolor=#ffef86 |
| 19 |
misc_feature |
|
| 11 |
misc_feature 3369..3811 |
|
| 12 |
/label="right_homology" |
|
| 13 |
/ApEinfo_revcolor=#faac61 |
|
| 14 |
/ApEinfo_fwdcolor=#faac61 |
|
| 15 |
misc_feature 3335..3368 |
|
| 20 | 16 |
/label="FRT" |
| 21 | 17 |
/ApEinfo_revcolor=#c7b0e3 |
| 22 | 18 |
/ApEinfo_fwdcolor=#c7b0e3 |
| 23 |
|
|
| 19 |
-10_signal complement(3291..3296) |
|
| 20 |
/label="cat promoter (counter-clockwise); CATATT" |
|
| 21 |
/ApEinfo_revcolor=#9eafd2 |
|
| 22 |
/ApEinfo_fwdcolor=#9eafd2 |
|
| 23 |
CDS complement(2565..3005) |
|
| 24 | 24 |
/label="cat CDS" |
| 25 | 25 |
/ApEinfo_revcolor=#c7b0e3 |
| 26 | 26 |
/ApEinfo_fwdcolor=#c7b0e3 |
| 27 |
|
|
| 27 |
gene complement(3006..3224) |
|
| 28 |
/label="cat gene" |
|
| 29 |
/ApEinfo_revcolor=#75c6a9 |
|
| 30 |
/ApEinfo_fwdcolor=#75c6a9 |
|
| 31 |
marker complement(936..1796) |
|
| 32 |
/label="amp marker" |
|
| 33 |
/ApEinfo_revcolor=#f8d3a9 |
|
| 34 |
/ApEinfo_fwdcolor=#f8d3a9 |
|
| 35 |
promoter complement(1838..1866) |
|
| 36 |
/label="amp prom" |
|
| 37 |
/ApEinfo_revcolor=#ff9ccd |
|
| 38 |
/ApEinfo_fwdcolor=#ff9ccd |
|
| 39 |
misc_feature 2530..2563 |
|
| 40 |
/label="FRT" |
|
| 41 |
/ApEinfo_revcolor=#c7b0e3 |
|
| 42 |
/ApEinfo_fwdcolor=#c7b0e3 |
|
| 43 |
-35_signal complement(3314..3319) |
|
| 28 | 44 |
/label="cat promoter (counter-clockwise); ACGTAA" |
| 29 | 45 |
/ApEinfo_revcolor=#c7b0e3 |
| 30 | 46 |
/ApEinfo_fwdcolor=#c7b0e3 |
| 47 |
misc_feature 1996..1997 |
|
| 48 |
/label="Geneious type: origin" |
|
| 49 |
/ApEinfo_revcolor=#c6c9d1 |
|
| 50 |
/ApEinfo_fwdcolor=#c6c9d1 |
|
| 51 |
CDS complement(3006..3224) |
|
| 52 |
/label="cat CDS" |
|
| 53 |
/ApEinfo_revcolor=#c7b0e3 |
|
| 54 |
/ApEinfo_fwdcolor=#c7b0e3 |
|
| 31 | 55 |
rep_origin 151..532 |
| 32 | 56 |
/label="rep_origin" |
| 33 | 57 |
/ApEinfo_revcolor=#d6b295 |
| 34 | 58 |
/ApEinfo_fwdcolor=#d6b295 |
| 35 |
promoter complement(1838..1866) |
|
| 36 |
/label="amp prom" |
|
| 37 |
/ApEinfo_revcolor=#ff9ccd |
|
| 38 |
/ApEinfo_fwdcolor=#ff9ccd |
|
| 39 |
-10_signal complement(3257..3262) |
|
| 40 |
/label="cat promoter (counter-clockwise); CATATT" |
|
| 41 |
/ApEinfo_revcolor=#9eafd2 |
|
| 42 |
/ApEinfo_fwdcolor=#9eafd2 |
|
| 43 |
misc_feature 1996..1997 |
|
| 44 |
/label="Geneious type: origin" |
|
| 45 |
/ApEinfo_revcolor=#c6c9d1 |
|
| 46 |
/ApEinfo_fwdcolor=#c6c9d1 |
|
| 47 |
marker complement(936..1796) |
|
| 48 |
/label="amp marker" |
|
| 49 |
/ApEinfo_revcolor=#f8d3a9 |
|
| 50 |
/ApEinfo_fwdcolor=#f8d3a9 |
|
| 51 |
misc_feature 3335..3777 |
|
| 52 |
/label="right_homology" |
|
| 53 |
/ApEinfo_revcolor=#faac61 |
|
| 54 |
/ApEinfo_fwdcolor=#faac61 |
|
| 55 |
misc_feature 3304..3331 |
|
| 56 |
/label="overlap" |
|
| 57 |
/ApEinfo_revcolor=#b4abac |
|
| 58 |
/ApEinfo_fwdcolor=#b4abac |
|
| 59 | 59 |
ORIGIN |
| 60 | 60 |
1 agaggcggtt tgcgtattgg gcgctcttcc gcttcctcgc tcactgaccc gctgcgctcg |
| 61 | 61 |
61 gtcgttcggc tgcggcgagc ggtatcagct cactcaaagg cggtaatacg gttatccaca |
| 62 | 62 |
121 gaatcagggg ataacgcagg aaagaacatg ggcagttcaa cctgttgata gtacgtacta |
| 63 | 63 |
181 agctctcatg tttcacgtac taagctctca agtttaacgt actaagctct catgtttaac |
| 64 | 64 |
241 gaactaaacc ctcatggcta acgtactaag ctctcatggc taacgtacta agctctcatg |
| 65 | 65 |
301 tttcacgtac taagctctca tgtttgaaca ataaaattaa tataaatcag caacttaaat |
| 66 | 66 |
361 agcctctaag gttttaagtt ttataagaaa aaaaagaata tataaggctt ttaaagcttt |
| 67 | 67 |
421 taaggtttaa cggttgtgga caacaagcca gggatgtaac gcactgagaa gcccttagag |
| 68 | 68 |
481 cctctcaaag caattttgag tgacacagga acacttaacg gctgacaacc ggctggtaac |
| 69 | 69 |
541 aggattagca gagcgaggta tgtaggcggt gctacagagt tcttgaagtg gtggcctaac |
| 70 | 70 |
601 tacggctaca ctagaaggac agtatttggt atctgcgctc tgctgaagcc agttaccttc |
| 71 | 71 |
661 ggaaaaagag ttggtagctc ttgatccggc aaacaaacca ccgctggtag cggtggtttt |
| 72 | 72 |
721 tttgtttgca agcagcagat tacgcgcaga aaaaaaggat ctcaagaaga tcctttgatc |
| 73 | 73 |
781 ttttctacgg ggtctgacgc tcagtggaac gaaaactcac gttaagggat tttggtcatg |
| 74 | 74 |
841 agattatcaa aaaggatctt cacctagatc cttttaaatt aaaaatgaag ttttaaatca |
| ... |
@@ -86,38 +86,39 @@ ORIGIN |
|
| 86 | 86 |
1561 aataccgcgc cacatagcag aactttaaaa gtgctcatca ttggaaaacg ttcttcgggg |
| 87 | 87 |
1621 cgaaaactct caaggatctt accgctgttg agatccagtt cgatgtaacc cactcgtgca |
| 88 | 88 |
1681 cccaactgat cttcagcatc ttttactttc accagcgttt ctgggtgagc aaaaacagga |
| 89 | 89 |
1741 aggcaaaatg ccgcaaaaaa gggaataagg gcgacacgga aatgttgaat actcatactc |
| 90 | 90 |
1801 ttcctttttc aatattattg aagcatttat cagggttatt gtctcatgag cggatacata |
| 91 | 91 |
1861 tttgaatgta tttagaaaaa taaacaaata ggggttccgc gcacatttcc ccgaaaagtg |
| 92 | 92 |
1921 ccacctgacg tctaagaaac cattattatc atgacattaa cctataaaaa taggcgtatc |
| 93 | 93 |
1981 acgaggccct ttcgtctcgc gcgtttcggt gatgacggtg aaaacctctg acacatgcag |
| 94 | 94 |
2041 ctcccggaga cggtcacagc ttgtctgtaa gcggatgccg tagtcaaatt caccacgccc |
| 95 | 95 |
2101 tgcgcaccgt cgcggggcgt tttgctgtta aatcaataga ttatttttgg catgattctt |
| 96 | 96 |
2161 gtaatgccag caagagattt catatttggg agagcatcat gctggaacta ctttttgtga |
| 97 | 97 |
2221 ttggcttttt tgtcatgctg atggtcaccg gcgtttcgtt gctgggcatt atcgccgcgc |
| 98 | 98 |
2281 tggttgtggc gacggccatt atgttcctcg gcggtatgct ggcattgatg attaagttgc |
| 99 | 99 |
2341 tgccgtggtt actactggcg attgcggtgg tgtgggttat taaggcgatt aaagcaccaa |
| 100 | 100 |
2401 aagtgccgaa atatcagcgt tatgaccgct ggcgttacta agggattgtg cggatgatca |
| 101 | 101 |
2461 caacctaagg ttttatcctt agaacaaaat aggaattgat aatcaaatct gtcactattg |
| 102 |
2521 cgtGGATCCa ttacgccccg ccctgccact catcgcagta ctgttgtaat tcattaagca |
|
| 103 |
2581 ttctgccgac atggaagcca tcacaaacgg catgatgaac ctgaatcgcc agcggcatca |
|
| 104 |
2641 gcaccttgtc gccttgcgta taatatttgc ccatggtgaa aacgggggcg aagaagttgt |
|
| 105 |
2701 ccatattggc cacgtttaaa tcaaaactgg tgaaactcac ccagggattg gctgagacga |
|
| 106 |
2761 aaaacatatt ctcaataaac cctttaggga aataggccag gttttcaccg taacacgcca |
|
| 107 |
2821 catcttgcga atatatgtgt agaaactgcc ggaaatcgtc gtggtattca ctccagagcg |
|
| 108 |
2881 atgaaaacgt ttcagtttgc tcatggaaaa cggtgtaaca agggtgaaca ctatcccata |
|
| 109 |
2941 tcaccagctc accgtctttc attgccatac ggaattccgg atgagcattc atcaggcggg |
|
| 110 |
3001 caagaatgtg aataaaggcc ggataaaact tgtgcttatt tttctttacg gtctttaaaa |
|
| 111 |
3061 aggccgtaat atccagctga acggtctggt tataggtaca ttgagcaact gactgaaatg |
|
| 112 |
3121 cctcaaaatg ttctttacga tgccattggg atatatcaac ggtggtatat ccagtgattt |
|
| 113 |
3181 ttttctccat tttagcttcc ttagctcctg aaaatctcga taactcaaaa aatacgcccg |
|
| 114 |
3241 gtagtgatct tatttcatta tggtgaaagt tggaacctct tacgtgccga tcaacgtctc |
|
| 115 |
3301 gaagttccta ttctctagaa agtataggaa cttcgtgctg taccctacat acagccgaac |
|
| 116 |
3361 tataaaaaga aagggcttcc caggtggaag ccctatttct tttatggaat cagcaggctg |
|
| 117 |
3421 gaaccttgcg tcgcccggct ttccagaatc tcatgcgcac gctgcgcatc cttcagcgga |
|
| 118 |
3481 tatttctgct gctcggcgac atcgacctta atcacaccgc tggcaatcaa agagaacagt |
|
| 119 |
3541 tcattactgg cctcggttaa ttcctcccgc gtggtgatat agccttgcag ggaagggcgt |
|
| 120 |
3601 gtcacataca acgagccttt ttgattgaga atgcctaagt tcacaccggt aaccgcacct |
|
| 121 |
3661 gatgagttgc caaaactgac cattaagccg cggcgttgca ggcaatccag cgaccgttcc |
|
| 122 |
|
|
| 102 |
2521 cgtGGATCCg aagttcctat tctctagaaa gtataggaac ttcattacgc cccgccctgc |
|
| 103 |
2581 cactcatcgc agtactgttg taattcatta agcattctgc cgacatggaa gccatcacaa |
|
| 104 |
2641 acggcatgat gaacctgaat cgccagcggc atcagcacct tgtcgccttg cgtataatat |
|
| 105 |
2701 ttgcccatgg tgaaaacggg ggcgaagaag ttgtccatat tggccacgtt taaatcaaaa |
|
| 106 |
2761 ctggtgaaac tcacccaggg attggctgag acgaaaaaca tattctcaat aaacccttta |
|
| 107 |
2821 gggaaatagg ccaggttttc accgtaacac gccacatctt gcgaatatat gtgtagaaac |
|
| 108 |
2881 tgccggaaat cgtcgtggta ttcactccag agcgatgaaa acgtttcagt ttgctcatgg |
|
| 109 |
2941 aaaacggtgt aacaagggtg aacactatcc catatcacca gctcaccgtc tttcattgcc |
|
| 110 |
3001 atacggaatt ccggatgagc attcatcagg cgggcaagaa tgtgaataaa ggccggataa |
|
| 111 |
3061 aacttgtgct tatttttctt tacggtcttt aaaaaggccg taatatccag ctgaacggtc |
|
| 112 |
3121 tggttatagg tacattgagc aactgactga aatgcctcaa aatgttcttt acgatgccat |
|
| 113 |
3181 tgggatatat caacggtggt atatccagtg atttttttct ccattttagc ttccttagct |
|
| 114 |
3241 cctgaaaatc tcgataactc aaaaaatacg cccggtagtg atcttatttc attatggtga |
|
| 115 |
3301 aagttggaac ctcttacgtg ccgatcaacg tctcgaagtt cctattctct agaaagtata |
|
| 116 |
3361 ggaacttcgt gctgtaccct acatacagcc gaactataaa aagaaagggc ttcccaggtg |
|
| 117 |
3421 gaagccctat ttcttttatg gaatcagcag gctggaacct tgcgtcgccc ggctttccag |
|
| 118 |
3481 aatctcatgc gcacgctgcg catccttcag cggatatttc tgctgctcgg cgacatcgac |
|
| 119 |
3541 cttaatcaca ccgctggcaa tcaaagagaa cagttcatta ctggcctcgg ttaattcctc |
|
| 120 |
3601 ccgcgtggtg atatagcctt gcagggaagg gcgtgtcaca tacaacgagc ctttttgatt |
|
| 121 |
3661 gagaatgcct aagttcacac cggtaaccgc acctgatgag ttgccaaaac tgaccattaa |
|
| 122 |
3721 gccgcggcgt tgcaggcaat ccagcgaccg ttcccaggtg tctctgccca cggaatcgta |
|
| 123 |
3781 caccacgcgc actttcttac cgccggtgat c |
|
| 123 | 124 |
// |
| ... |
No newline at end of file |
|
0 comments (0 inline, 0 general)