Location: E.coli-Barcoding/pEC-CRISPR-Vector.gb

7.4 KiB
text/plain
jtl
Vector for CRISPR barcoding
LOCUS pEC-CRISPR-Vector 3178 bp ds-DNA circular 11-DEC-2019
DEFINITION .
SOURCE Cloning vector pUC19
ORGANISM Cloning vector pUC19 other sequences; artificial sequences;
vectors.
FEATURES Location/Qualifiers
misc_RNA complement(1359..1911)
/label="RNAII transcript (complementary strand)"
/ApEinfo_revcolor=#b7e6d7
/ApEinfo_fwdcolor=#b7e6d7
gene complement(2118..2978)
/label="bla gene"
/ApEinfo_revcolor=#75c6a9
/ApEinfo_fwdcolor=#75c6a9
CDS 1123..1162
/label="spy-tem"
/ApEinfo_revcolor=#d6b295
/ApEinfo_fwdcolor=#d6b295
-35_signal complement(3043..3048)
/label="bla promoter (counter-clockwise); TTCAAA"
/ApEinfo_revcolor=#85dae9
/ApEinfo_fwdcolor=#85dae9
rep_origin complement(1359..1947)
/label="pMB1 origin of replication (counter-clockwise)(RNAII -35 to RNA/DNA switch point)"
/ApEinfo_revcolor=#d6b295
/ApEinfo_fwdcolor=#d6b295
-10_signal complement(3022..3027)
/label="bla promoter (counter-clockwise); GAGACA"
/ApEinfo_revcolor=#85dae9
/ApEinfo_fwdcolor=#85dae9
-35_signal 1765..1770
/label="RNAI promoter (clockwise); TTGAAG"
/ApEinfo_revcolor=#f8d3a9
/ApEinfo_fwdcolor=#f8d3a9
misc_feature 535..977
/label="right_homology"
/ApEinfo_revcolor=#faac61
/ApEinfo_fwdcolor=#faac61
CDS 1081..1122
/label="SP_scaffold"
/ApEinfo_revcolor=#f58a5e
/ApEinfo_fwdcolor=#f58a5e
misc_RNA 1801..1908
/label="RNAI transcript"
/ApEinfo_revcolor=#75c6a9
/ApEinfo_fwdcolor=#75c6a9
-35_signal complement(1942..1947)
/label="RNAII promoter (counter-clockwise); TTGAGA"
/ApEinfo_revcolor=#ffef86
/ApEinfo_fwdcolor=#ffef86
-10_signal 1787..1792
/label="RNAI promoter (clockwise); GCTACA"
/ApEinfo_revcolor=#b1ff67
/ApEinfo_fwdcolor=#b1ff67
-10_signal complement(1921..1926)
/label="RNAII promoter (counter-clockwise); CGTAAT"
/ApEinfo_revcolor=#d6b295
/ApEinfo_fwdcolor=#d6b295
misc_feature 84..526
/label="left_homology"
/ApEinfo_revcolor=#ffef86
/ApEinfo_fwdcolor=#ffef86
CDS 1026..1054
/label="pJ23119"
/ApEinfo_revcolor=#ffef86
/ApEinfo_fwdcolor=#ffef86
sig_peptide complement(2910..2978)
/label="bla sig_peptide"
/ApEinfo_revcolor=#b7e6d7
/ApEinfo_fwdcolor=#b7e6d7
CDS complement(2118..2978)
/label="bla CDS"
/ApEinfo_revcolor=#faac61
/ApEinfo_fwdcolor=#faac61
ORIGIN
1 tcgcgcgttt cggtgatgac ggtgaaaacc tctgacacat gcagctcccg gagacggtca
61 cagcttgtct gtaagcggat gccgtagtca aattcaccac gccctgcgca ccgtcgcggg
121 gcgttttgct gttaaatcaa tagattattt ttggcatgat tcttgtaatg ccagcaagag
181 atttcatatt tgggagagca tcatgctgga actacttttt gtgattggct tttttgtcat
241 gctgatggtc accggcgttt cgttgctggg cattatcgcc gcgctggttg tggcgacggc
301 cattatgttc ctcggcggta tgctggcatt gatgattaag ttgctgccgt ggttactact
361 ggcgattgcg gtggtgtggg ttattaaggc gattaaagca ccaaaagtgc cgaaatatca
421 gcgttatgac cgctggcgtt actaagggat tgtgcggatg atcacaacct aaggttttat
481 ccttagaaca aaataggaat tgataatcaa atctgtcact attgcgtGCA TGCagtgctg
541 taccctacat acagccgaac tataaaaaga aagggcttcc caggtggaag ccctatttct
601 tttatggaat cagcaggctg gaaccttgcg tcgcccggct ttccagaatc tcatgcgcac
661 gctgcgcatc cttcagcgga tatttctgct gctcggcgac atcgacctta atcacaccgc
721 tggcaatcaa agagaacagt tcattactgg cctcggttaa ttcctcccgc gtggtgatat
781 agccttgcag ggaagggcgt gtcacataca acgagccttt ttgattgaga atgcctaagt
841 tcacaccggt aaccgcacct gatgagttgc caaaactgac cattaagccg cggcgttgca
901 ggcaatccag cgaccgttcc caggtgtctc tgcccacgga atcgtacacc acgcgcactt
961 tcttaccgcc ggtgatcttc tccttacgca tctgtgcggt atttcacacc gcatatgctg
1021 gatccttgac agctagctca gtcctaggta taatactagt CAGCACGATG AATCTGTTAG
1081 gttttagagc tagaaatagc aagttaaaat aaggctagtc cgttatcaac ttgaaaaagt
1141 ggcaccgagt cggtgctttt tttgaattct ctagagtcga cctgcagaag cttagatcta
1201 ttaccctgtt atccctactc gagttcatgt gcagctccag ctcactcaaa ggcggtaata
1261 cggttatcca cagaatcagg ggataacgca ggaaagaaca tgtgagcaaa aggccagcaa
1321 aaggccagga accgtaaaaa ggccgcgttg ctggcgtttt tccataggct ccgcccccct
1381 gacgagcatc acaaaaatcg acgctcaagt cagaggtggc gaaacccgac aggactataa
1441 agataccagg cgtttccccc tggaagctcc ctcgtgcgct ctcctgttcc gaccctgccg
1501 cttaccggat acctgtccgc ctttctccct tcgggaagcg tggcgctttc tcatagctca
1561 cgctgtaggt atctcagttc ggtgtaggtc gttcgctcca agctgggctg tgtgcacgaa
1621 ccccccgttc agcccgaccg ctgcgcctta tccggtaact atcgtcttga gtccaacccg
1681 gtaagacacg acttatcgcc actggcagca gccactggta acaggattag cagagcgagg
1741 tatgtaggcg gtgctacaga gttcttgaag tggtggccta actacggcta cactagaaga
1801 acagtatttg gtatctgcgc tctgctgaag ccagttacct tcggaaaaag agttggtagc
1861 tcttgatccg gcaaacaaac caccgctggt agcggtggtt tttttgtttg caagcagcag
1921 attacgcgca gaaaaaaagg atctcaagaa gatcctttga tcttttctac ggggtctgac
1981 gctcagtgga acgaaaactc acgttaaggg attttggtca tgagattatc aaaaaggatc
2041 ttcacctaga tccttttaaa ttaaaaatga agttttaaat caatctaaag tatatatgag
2101 taaacttggt ctgacagtta ccaatgctta atcagtgagg cacctatctc agcgatctgt
2161 ctatttcgtt catccatagt tgcctgactc cccgtcgtgt agataactac gatacgggag
2221 ggcttaccat ctggccccag tgctgcaatg ataccgcgag acccacgctc accggctcca
2281 gatttatcag caataaacca gccagccgga agggccgagc gcagaagtgg tcctgcaact
2341 ttatccgcct ccatccagtc tattaattgt tgccgggaag ctagagtaag tagttcgcca
2401 gttaatagtt tgcgcaacgt tgttgccatt gctacaggca tcgtggtgtc acgctcgtcg
2461 tttggtatgg cttcattcag ctccggttcc caacgatcaa ggcgagttac atgatccccc
2521 atgttgtgca aaaaagcggt tagctccttc ggtcctccga tcgttgtcag aagtaagttg
2581 gccgcagtgt tatcactcat ggttatggca gcactgcata attctcttac tgtcatgcca
2641 tccgtaagat gcttttctgt gactggtgag tactcaacca agtcattctg agaatagtgt
2701 atgcggcgac cgagttgctc ttgcccggcg tcaatacggg ataataccgc gccacatagc
2761 agaactttaa aagtgctcat cattggaaaa cgttcttcgg ggcgaaaact ctcaaggatc
2821 ttaccgctgt tgagatccag ttcgatgtaa cccactcgtg cacccaactg atcttcagca
2881 tcttttactt tcaccagcgt ttctgggtga gcaaaaacag gaaggcaaaa tgccgcaaaa
2941 aagggaataa gggcgacacg gaaatgttga atactcatac tcttcctttt tcaatattat
3001 tgaagcattt atcagggtta ttgtctcatg agcggataca tatttgaatg tatttagaaa
3061 aataaacaaa taggggttcc gcgcacattt ccccgaaaag tgccacctga cgtctaagaa
3121 accattatta tcatgacatt aacctataaa aataggcgta tcacgaggcc ctttcgtc
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