Location: E.coli-Barcoding/pEC-Vector.gb

7.3 KiB
text/plain
jtl
Vector for lambda-red barcoding
LOCUS pEC-Vector 3777 bp ds-DNA circular 11-DEC-2019
DEFINITION .
ACCESSION pTarget
SOURCE Unknown.
ORGANISM Unknown Unclassified.
FEATURES Location/Qualifiers
CDS complement(2531..2971)
/label="cat CDS"
/ApEinfo_revcolor=#c7b0e3
/ApEinfo_fwdcolor=#c7b0e3
gene complement(2972..3190)
/label="cat gene"
/ApEinfo_revcolor=#75c6a9
/ApEinfo_fwdcolor=#75c6a9
misc_feature 2080..2522
/label="left_homology"
/ApEinfo_revcolor=#ffef86
/ApEinfo_fwdcolor=#ffef86
misc_feature 3301..3334
/label="FRT"
/ApEinfo_revcolor=#c7b0e3
/ApEinfo_fwdcolor=#c7b0e3
CDS complement(2972..3190)
/label="cat CDS"
/ApEinfo_revcolor=#c7b0e3
/ApEinfo_fwdcolor=#c7b0e3
-35_signal complement(3280..3285)
/label="cat promoter (counter-clockwise); ACGTAA"
/ApEinfo_revcolor=#c7b0e3
/ApEinfo_fwdcolor=#c7b0e3
rep_origin 151..532
/label="rep_origin"
/ApEinfo_revcolor=#d6b295
/ApEinfo_fwdcolor=#d6b295
promoter complement(1838..1866)
/label="amp prom"
/ApEinfo_revcolor=#ff9ccd
/ApEinfo_fwdcolor=#ff9ccd
-10_signal complement(3257..3262)
/label="cat promoter (counter-clockwise); CATATT"
/ApEinfo_revcolor=#9eafd2
/ApEinfo_fwdcolor=#9eafd2
misc_feature 1996..1997
/label="Geneious type: origin"
/ApEinfo_revcolor=#c6c9d1
/ApEinfo_fwdcolor=#c6c9d1
marker complement(936..1796)
/label="amp marker"
/ApEinfo_revcolor=#f8d3a9
/ApEinfo_fwdcolor=#f8d3a9
misc_feature 3335..3777
/label="right_homology"
/ApEinfo_revcolor=#faac61
/ApEinfo_fwdcolor=#faac61
misc_feature 3304..3331
/label="overlap"
/ApEinfo_revcolor=#b4abac
/ApEinfo_fwdcolor=#b4abac
ORIGIN
1 agaggcggtt tgcgtattgg gcgctcttcc gcttcctcgc tcactgaccc gctgcgctcg
61 gtcgttcggc tgcggcgagc ggtatcagct cactcaaagg cggtaatacg gttatccaca
121 gaatcagggg ataacgcagg aaagaacatg ggcagttcaa cctgttgata gtacgtacta
181 agctctcatg tttcacgtac taagctctca agtttaacgt actaagctct catgtttaac
241 gaactaaacc ctcatggcta acgtactaag ctctcatggc taacgtacta agctctcatg
301 tttcacgtac taagctctca tgtttgaaca ataaaattaa tataaatcag caacttaaat
361 agcctctaag gttttaagtt ttataagaaa aaaaagaata tataaggctt ttaaagcttt
421 taaggtttaa cggttgtgga caacaagcca gggatgtaac gcactgagaa gcccttagag
481 cctctcaaag caattttgag tgacacagga acacttaacg gctgacaacc ggctggtaac
541 aggattagca gagcgaggta tgtaggcggt gctacagagt tcttgaagtg gtggcctaac
601 tacggctaca ctagaaggac agtatttggt atctgcgctc tgctgaagcc agttaccttc
661 ggaaaaagag ttggtagctc ttgatccggc aaacaaacca ccgctggtag cggtggtttt
721 tttgtttgca agcagcagat tacgcgcaga aaaaaaggat ctcaagaaga tcctttgatc
781 ttttctacgg ggtctgacgc tcagtggaac gaaaactcac gttaagggat tttggtcatg
841 agattatcaa aaaggatctt cacctagatc cttttaaatt aaaaatgaag ttttaaatca
901 atctaaagta tatatgagta aacttggtct gacagttacc aatgcttaat cagtgaggca
961 cctatctcag cgatctgtct atttcgttca tccatagttg cctgactccc cgtcgtgtag
1021 ataactacga tacgggaggg cttaccatct ggccccagtg ctgcaatgat accgcgagac
1081 ccacgctcac cggctccaga tttatcagca ataaaccagc cagccggaag ggccgagcgc
1141 agaagtggtc ctgcaacttt atccgcctcc atccagtcta ttaattgttg ccgggaagct
1201 agagtaagta gttcgccagt taatagtttg cgcaacgttg ttgccattgc tacaggcatc
1261 gtggtgtcac gctcgtcgtt tggtatggct tcattcagct ccggttccca acgatcaagg
1321 cgagttacat gatcccccat gttgtgcaaa aaagcggtta gctccttcgg tcctccgatc
1381 gttgtcagaa gtaagttggc cgcagtgtta tcactcatgg ttatggcagc actgcataat
1441 tctcttactg tcatgccatc cgtaagatgc ttttctgtga ctggtgagta ctcaaccaag
1501 tcattctgag aatagtgtat gcggcgaccg agttgctctt gcccggcgtc aatacgggat
1561 aataccgcgc cacatagcag aactttaaaa gtgctcatca ttggaaaacg ttcttcgggg
1621 cgaaaactct caaggatctt accgctgttg agatccagtt cgatgtaacc cactcgtgca
1681 cccaactgat cttcagcatc ttttactttc accagcgttt ctgggtgagc aaaaacagga
1741 aggcaaaatg ccgcaaaaaa gggaataagg gcgacacgga aatgttgaat actcatactc
1801 ttcctttttc aatattattg aagcatttat cagggttatt gtctcatgag cggatacata
1861 tttgaatgta tttagaaaaa taaacaaata ggggttccgc gcacatttcc ccgaaaagtg
1921 ccacctgacg tctaagaaac cattattatc atgacattaa cctataaaaa taggcgtatc
1981 acgaggccct ttcgtctcgc gcgtttcggt gatgacggtg aaaacctctg acacatgcag
2041 ctcccggaga cggtcacagc ttgtctgtaa gcggatgccg tagtcaaatt caccacgccc
2101 tgcgcaccgt cgcggggcgt tttgctgtta aatcaataga ttatttttgg catgattctt
2161 gtaatgccag caagagattt catatttggg agagcatcat gctggaacta ctttttgtga
2221 ttggcttttt tgtcatgctg atggtcaccg gcgtttcgtt gctgggcatt atcgccgcgc
2281 tggttgtggc gacggccatt atgttcctcg gcggtatgct ggcattgatg attaagttgc
2341 tgccgtggtt actactggcg attgcggtgg tgtgggttat taaggcgatt aaagcaccaa
2401 aagtgccgaa atatcagcgt tatgaccgct ggcgttacta agggattgtg cggatgatca
2461 caacctaagg ttttatcctt agaacaaaat aggaattgat aatcaaatct gtcactattg
2521 cgtGGATCCa ttacgccccg ccctgccact catcgcagta ctgttgtaat tcattaagca
2581 ttctgccgac atggaagcca tcacaaacgg catgatgaac ctgaatcgcc agcggcatca
2641 gcaccttgtc gccttgcgta taatatttgc ccatggtgaa aacgggggcg aagaagttgt
2701 ccatattggc cacgtttaaa tcaaaactgg tgaaactcac ccagggattg gctgagacga
2761 aaaacatatt ctcaataaac cctttaggga aataggccag gttttcaccg taacacgcca
2821 catcttgcga atatatgtgt agaaactgcc ggaaatcgtc gtggtattca ctccagagcg
2881 atgaaaacgt ttcagtttgc tcatggaaaa cggtgtaaca agggtgaaca ctatcccata
2941 tcaccagctc accgtctttc attgccatac ggaattccgg atgagcattc atcaggcggg
3001 caagaatgtg aataaaggcc ggataaaact tgtgcttatt tttctttacg gtctttaaaa
3061 aggccgtaat atccagctga acggtctggt tataggtaca ttgagcaact gactgaaatg
3121 cctcaaaatg ttctttacga tgccattggg atatatcaac ggtggtatat ccagtgattt
3181 ttttctccat tttagcttcc ttagctcctg aaaatctcga taactcaaaa aatacgcccg
3241 gtagtgatct tatttcatta tggtgaaagt tggaacctct tacgtgccga tcaacgtctc
3301 gaagttccta ttctctagaa agtataggaa cttcgtgctg taccctacat acagccgaac
3361 tataaaaaga aagggcttcc caggtggaag ccctatttct tttatggaat cagcaggctg
3421 gaaccttgcg tcgcccggct ttccagaatc tcatgcgcac gctgcgcatc cttcagcgga
3481 tatttctgct gctcggcgac atcgacctta atcacaccgc tggcaatcaa agagaacagt
3541 tcattactgg cctcggttaa ttcctcccgc gtggtgatat agccttgcag ggaagggcgt
3601 gtcacataca acgagccttt ttgattgaga atgcctaagt tcacaccggt aaccgcacct
3661 gatgagttgc caaaactgac cattaagccg cggcgttgca ggcaatccag cgaccgttcc
3721 caggtgtctc tgcccacgga atcgtacacc acgcgcactt tcttaccgcc ggtgatc
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